Intercalibration of counting methods for Ostreopsis spp. blooms in the Mediterranean Sea

Ecological Indicators

Abstract:
This paper describes the adoption and validation of two innovative methods for the automated count of Ostreopsis spp. concentration in sea water: a molecular assay based on RT-qPCR and an opto-electronic device implementing automatic recognition algorithms. The proposed approaches were tested on samples coming from different locations along the Mediterranean Sea and compared with the standard counting method based on microscopy observation by a taxonomy expert. The results demonstrate the effectiveness of both automatic approaches which provide a valuable tool, mostly cost and time effective, for the establishment of wide pan-Mediterranean monitoring strategies of Ostreopsis spp. blooms. Moreover, the two automatic methods demonstrated the ability to discriminate for the presence of a different but similar species, O. fattorussoi, for which new species-specific qPCR primers were developed.

https://www.sciencedirect.com/science/article/pii/S1470160X17304776

This publication has been produced with the financial assistance of the European Union under the ENPI CBC Mediterranean Sea Basin Programme. Authors wish to thank Laia Viure and Luca Nitopi for unvaluable support in the field and in the laboratory. Magda Vila also acknowledges the support of the Spanish Government (MINECO) throught the project OstreoRisk (CTM2014-53818-R).